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RNU5D-1 RNA, U5D small nuclear 1 [ Homo sapiens (human) ]

Gene ID: 26830, updated on 13-Feb-2019

Summary

Official Symbol
RNU5D-1provided by HGNC
Official Full Name
RNA, U5D small nuclear 1provided by HGNC
Primary source
HGNC:HGNC:10214
See related
Ensembl:ENSG00000200169
Gene type
snRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U5DL; U5DS; RNU5D

Genomic context

See RNU5D-1 in Genome Data Viewer
Location:
1p34.1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 1 NC_000001.11 (44731069..44731168, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (45196741..45196840, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene transmembrane protein 53 Neighboring gene small nucleolar RNA, C/D box 145 Neighboring gene armadillo-like helical domain containing 1 Neighboring gene uncharacterized LOC105378690 Neighboring gene RNA, U5F small nuclear 1 Neighboring gene kinesin family member 2C Neighboring gene small nucleolar RNA, C/D box 160 Neighboring gene small nucleolar RNA, C/D box 55 Neighboring gene ribosomal protein S8

Genomic regions, transcripts, and products

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
formation of quadruple SL/U4/U5/U6 snRNP IEA
Inferred from Electronic Annotation
more info
 
spliceosomal tri-snRNP complex assembly IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 
U5 snRNP IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002755.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL122004
    Related
    ENST00000363299.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p12 Primary Assembly

    Range
    44731069..44731168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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