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SNORD54 small nucleolar RNA, C/D box 54 [ Homo sapiens (human) ]

Gene ID: 26795, updated on 13-May-2022

Summary

Official Symbol
SNORD54provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 54provided by HGNC
Primary source
HGNC:HGNC:10204
See related
Ensembl:ENSG00000238650 AllianceGenome:HGNC:10204
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U54; RNU54
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Genomic context

See SNORD54 in Genome Data Viewer
Location:
8q12.1
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (56073839..56073901, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (56450841..56450903, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (56986398..56986460, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene RNA, 7SL, cytoplasmic 323, pseudogene Neighboring gene proteasome 26S subunit, ATPase, 6 pseudogene 1 Neighboring gene ribosomal protein S20 Neighboring gene competing endogenous lncRNA 3 for miR-645 Neighboring gene nucleophosmin 1 pseudogene 21

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • RNA, U54 small nuclear
  • U54 small nuclear RNA
  • U54 snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002437.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    X96653
    Related
    ENST00000459159.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    56073839..56073901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    56450841..56450903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)