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SNORD63 small nucleolar RNA, C/D box 63 [ Homo sapiens (human) ]

Gene ID: 26785, updated on 10-Oct-2023

Summary

Official Symbol
SNORD63provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 63provided by HGNC
Primary source
HGNC:HGNC:10220
See related
Ensembl:ENSG00000206989 AllianceGenome:HGNC:10220
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U63; RNU63; SNORD63A
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Genomic context

See SNORD63 in Genome Data Viewer
Location:
5q31.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (138561043..138561110, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (139087292..139087359, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (137896732..137896799, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene eukaryotic translation termination factor 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:137859313-137860250 Neighboring gene Sharpr-MPRA regulatory region 2814 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:137878436-137879635 Neighboring gene heat shock protein family A (Hsp70) member 9 Neighboring gene small nucleolar RNA, C/D box 63B Neighboring gene uncharacterized LOC105379193 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:137910671-137911318 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:137911319-137911967 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23210 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23211 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23212 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:137945276-137945908 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:137945909-137946541 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:137946542-137947174 Neighboring gene ribosomal protein L10a pseudogene 10

Genomic regions, transcripts, and products

General gene information

Other Names

  • RNA, U63 small nucleolar

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002913.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    U72852
    Related
    ENST00000384262.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    138561043..138561110 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    139087292..139087359 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)