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PDIP_29930 DNA ligase [ Penicillium digitatum Pd1 ]

Gene ID: 26231313, updated on 27-Aug-2016

Summary

Gene symbol
PDIP_29930
Gene description
DNA ligase
Locus tag
PDIP_29930
Gene type
protein coding
RNA name
DNA ligase
RefSeq status
PROVISIONAL
Organism
Penicillium digitatum Pd1 (strain: Pd1, culture-collection: CECT:20795)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium

Genomic context

Location:
chromosome: Unknown
Exon count:
1

NW_014574610.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene RINT-1 family protein Neighboring gene Glutamate decarboxylase, putative

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
DNA ligase
XP_014536454.1
  • Ortholog: Aspergillus fumigatus : Q4WXY6

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_014574610.1 Reference assembly

    Range
    981273..983780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014680968.1XP_014536454.1  DNA ligase [Penicillium digitatum Pd1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K9GSY3
    Conserved Domains (4) summary
    cd07969
    Location:665810
    OBF_DNA_ligase_I; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase I is a DNA-binding module that is part of the catalytic core unit
    cd07900
    Location:394661
    Adenylation_DNA_ligase_I_Euk; Adenylation domain of eukaryotic DNA Ligase I
    PLN03113
    Location:59811
    PLN03113; DNA ligase 1; Provisional
    pfam04675
    Location:148321
    DNA_ligase_A_N; DNA ligase N terminus
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