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SPATA31A7 SPATA31 subfamily A member 7 [ Homo sapiens (human) ]

Gene ID: 26165, updated on 10-Oct-2023

Summary

Official Symbol
SPATA31A7provided by HGNC
Official Full Name
SPATA31 subfamily A member 7provided by HGNC
Primary source
HGNC:HGNC:32007
See related
Ensembl:ENSG00000276040 MIM:616584; AllianceGenome:HGNC:32007
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AEP1; C9orf36; FAM75A4; FAM75A7; C9orf36A; SPATA31A4
Summary
Predicted to be involved in cell differentiation and spermatogenesis. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis (RPKM 5.6) See more
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Genomic context

See SPATA31A7 in Genome Data Viewer
Location:
9q12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (61190036..61196280)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (41241027..41247265, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (65503366..65509610, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene contactin associated protein family member 3B pseudogene Neighboring gene uncharacterized LOC105379249 Neighboring gene uncharacterized LOC124902165 Neighboring gene family with sequence similarity 74 member A4 Neighboring gene uncharacterized LOC105379435

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
spermatogenesis-associated protein 31A7
Names
SPATA31 subfamily A, member 4
family with sequence similarity 75, member A4
family with sequence similarity 75, member A7
protein FAM75A4
protein FAM75A7
spermatogenesis-associated protein 31A4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015667.2NP_056482.2  spermatogenesis-associated protein 31A7

    See identical proteins and their annotated locations for NP_056482.2

    Status: VALIDATED

    Source sequence(s)
    BC040528, BX005040, DB085566
    Consensus CDS
    CCDS75838.1
    UniProtKB/Swiss-Prot
    Q4VX67, Q5TZK4, Q8IWB4, Q9Y4Q5
    UniProtKB/TrEMBL
    B2RUU1
    Related
    ENSP00000484807.1, ENST00000619167.2
    Conserved Domains (2) summary
    pfam14650
    Location:396754
    FAM75; FAM75 family
    pfam15371
    Location:76155
    DUF4599; Domain of unknown function (DUF4599)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    61190036..61196280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    41241027..41247265 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)