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RIBC2 RIB43A domain with coiled-coils 2 [ Homo sapiens (human) ]

Gene ID: 26150, updated on 17-Nov-2019

Summary

Official Symbol
RIBC2provided by HGNC
Official Full Name
RIB43A domain with coiled-coils 2provided by HGNC
Primary source
HGNC:HGNC:13241
See related
Ensembl:ENSG00000128408
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRIB; C22orf11
Expression
Biased expression in testis (RPKM 10.0) and bone marrow (RPKM 0.7) See more
Orthologs

Genomic context

See RIBC2 in Genome Data Viewer
Location:
22q13.31
Exon count:
10
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (45413693..45432509)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (45809572..45828302)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 118 member A Neighboring gene structural maintenance of chromosomes 1B Neighboring gene uncharacterized LOC107985537 Neighboring gene uncharacterized LOC105373066

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
nucleus HDA PubMed 

General protein information

Preferred Names
RIB43A-like with coiled-coils protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015653.5NP_056468.3  RIB43A-like with coiled-coils protein 2

    See identical proteins and their annotated locations for NP_056468.3

    Status: VALIDATED

    Source sequence(s)
    AK098586, AL021391, AL442116
    Consensus CDS
    CCDS14066.2
    UniProtKB/Swiss-Prot
    Q9H4K1
    UniProtKB/TrEMBL
    A0A087X0F7
    Related
    ENSP00000483356.1, ENST00000614167.2
    Conserved Domains (1) summary
    pfam05914
    Location:8382
    RIB43A; RIB43A

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    45413693..45432509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017028766.1XP_016884255.1  RIB43A-like with coiled-coils protein 2 isoform X3

  2. XM_005261524.4XP_005261581.1  RIB43A-like with coiled-coils protein 2 isoform X1

    See identical proteins and their annotated locations for XP_005261581.1

    UniProtKB/Swiss-Prot
    Q9H4K1
    Conserved Domains (1) summary
    pfam05914
    Location:1309
    RIB43A; RIB43A
  3. XM_011530126.2XP_011528428.1  RIB43A-like with coiled-coils protein 2 isoform X2

    Conserved Domains (1) summary
    pfam05914
    Location:21219
    RIB43A; RIB43A
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