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FAM230C family with sequence similarity 230 member C [ Homo sapiens (human) ]

Gene ID: 26080, updated on 13-May-2022

Summary

Official Symbol
FAM230Cprovided by HGNC
Official Full Name
family with sequence similarity 230 member Cprovided by HGNC
Primary source
HGNC:HGNC:24482
See related
Ensembl:ENSG00000279516 AllianceGenome:HGNC:24482
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00281; NCRNA00281
Expression
Restricted expression toward testis (RPKM 2.0) See more
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Genomic context

See FAM230C in Genome Data Viewer
Location:
13q11
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (18195297..18232016)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (13678802..13717342, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Unplaced Scaffold NT_113923.1 (24049..60768)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 36B-like Neighboring gene vomeronasal 1 receptor 111 pseudogene Neighboring gene eukaryotic translation initiation factor 3 subunit F pseudogene 2 Neighboring gene glutathione hydrolase light chain 1-like Neighboring gene gamma-glutamyltransferase 4 pseudogene Neighboring gene IGSF3 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • long intergenic non-protein coding RNA 281

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027278.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL356585, BC040613, DB056745
    Related
    ENST00000623511.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    18195297..18232016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_011332699.1 Reference GRCh38.p14 PATCHES

    Range
    193957..230676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    13678802..13717342 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)