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FAM32A family with sequence similarity 32 member A [ Homo sapiens (human) ]

Gene ID: 26017, updated on 21-Dec-2019

Summary

Official Symbol
FAM32Aprovided by HGNC
Official Full Name
family with sequence similarity 32 member Aprovided by HGNC
Primary source
HGNC:HGNC:24563
See related
Ensembl:ENSG00000105058 MIM:614554
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OTAG12; OTAG-12
Expression
Ubiquitous expression in duodenum (RPKM 31.4), small intestine (RPKM 30.9) and 25 other tissues See more
Orthologs

Genomic context

See FAM32A in Genome Data Viewer
Location:
19p13.11
Exon count:
4
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (16185184..16192046)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (16296235..16302857)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene RAB8A, member RAS oncogene family Neighboring gene hematopoietic SH2 domain containing Neighboring gene calcium and integrin binding family member 3 Neighboring gene adaptor related protein complex 1 subunit mu 1 Neighboring gene Kruppel like factor 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding HDA PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
apoptotic process IEA
Inferred from Electronic Annotation
more info
 
biological_process ND
No biological Data available
more info
 
cell cycle IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
protein FAM32A
Names
ovarian tumor associated gene-12

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014077.4NP_054796.1  protein FAM32A

    See identical proteins and their annotated locations for NP_054796.1

    Status: VALIDATED

    Source sequence(s)
    BC000639, BG749750
    Consensus CDS
    CCDS12341.1
    UniProtKB/Swiss-Prot
    Q9Y421
    UniProtKB/TrEMBL
    A0A024R7I4
    Related
    ENSP00000263384.6, ENST00000263384.12

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    16185184..16192046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011527898.1XP_011526200.1  protein FAM32A isoform X1

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