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PARM1 prostate androgen-regulated mucin-like protein 1 [ Homo sapiens (human) ]

Gene ID: 25849, updated on 17-Jun-2019

Summary

Official Symbol
PARM1provided by HGNC
Official Full Name
prostate androgen-regulated mucin-like protein 1provided by HGNC
Primary source
HGNC:HGNC:24536
See related
Ensembl:ENSG00000169116 MIM:617688
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
WSC4; Cipar1; PARM-1; DKFZP564O0823
Expression
Broad expression in thyroid (RPKM 83.3), colon (RPKM 61.9) and 21 other tissues See more
Orthologs

Genomic context

See PARM1 in Genome Data Viewer
Location:
4q13.3
Exon count:
5
Annotation release Status Assembly Chr Location
109.20190607 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (74933116..75050113)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (75858285..75975325)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377280 Neighboring gene heat shock protein family E (Hsp10) member 1 pseudogene 23 Neighboring gene uncharacterized LOC100507388 Neighboring gene uncharacterized LOC107986289 Neighboring gene long intergenic non-protein coding RNA 2562 Neighboring gene uncharacterized LOC100506253

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
positive regulation of telomerase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
cytosol IDA
Inferred from Direct Assay
more info
 
early endosome IDA
Inferred from Direct Assay
more info
PubMed 
endosome membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
intracellular membrane-bounded organelle IDA
Inferred from Direct Assay
more info
 
late endosome IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
prostate androgen-regulated mucin-like protein 1
Names
WSC4, cell wall integrity and stress response component 4 homolog
castration-induced prostatic apoptosis-related protein 1
prostatic androgen-regulated mucin-like protein 1
prostatic androgen-repressed message 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015393.4NP_056208.2  prostate androgen-regulated mucin-like protein 1 precursor

    See identical proteins and their annotated locations for NP_056208.2

    Status: VALIDATED

    Source sequence(s)
    AC098825, AC110760, AI767320
    Consensus CDS
    CCDS47077.1
    UniProtKB/Swiss-Prot
    Q6UWI2
    Related
    ENSP00000370224.3, ENST00000307428.7
    Conserved Domains (1) summary
    pfam17061
    Location:15310
    PARM; PARM

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    74933116..75050113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011531833.1XP_011530135.1  prostate androgen-regulated mucin-like protein 1 isoform X1

    Conserved Domains (1) summary
    pfam17061
    Location:50345
    PARM; PARM
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