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C2orf72 chromosome 2 open reading frame 72 [ Homo sapiens (human) ]

Gene ID: 257407, updated on 23-Nov-2021

Summary

Official Symbol
C2orf72provided by HGNC
Official Full Name
chromosome 2 open reading frame 72provided by HGNC
Primary source
HGNC:HGNC:27418
See related
Ensembl:ENSG00000204128
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in liver (RPKM 23.3), brain (RPKM 16.7) and 8 other tissues See more
Orthologs
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Genomic context

See C2orf72 in Genome Data Viewer
Location:
2q37.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (231037523..231049719)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (231902238..231914434)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene SPATA3 antisense RNA 1 (head to head) Neighboring gene spermatogenesis associated 3 Neighboring gene uncharacterized LOC112268432 Neighboring gene proteasome 26S subunit, non-ATPase 1 Neighboring gene 5-hydroxytryptamine receptor 2B Neighboring gene RNA, U1 small nuclear 93, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
uncharacterized protein C2orf72

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001144994.2NP_001138466.1  uncharacterized protein C2orf72

    See identical proteins and their annotated locations for NP_001138466.1

    Status: VALIDATED

    Source sequence(s)
    AC009407, AF007149, AF070612, AV658788, DA141613, DB303203
    Consensus CDS
    CCDS46539.1
    UniProtKB/Swiss-Prot
    A6NCS6
    Related
    ENSP00000362743.4, ENST00000373640.5
    Conserved Domains (1) summary
    pfam15443
    Location:139293
    DUF4630; Domain of unknown function (DUF4630)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    231037523..231049719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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