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MOCS2-DT MOCS2 divergent transcript [ Homo sapiens (human) ]

Gene ID: 257396, updated on 13-May-2022

Summary

Official Symbol
MOCS2-DTprovided by HGNC
Official Full Name
MOCS2 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:27417
See related
Ensembl:ENSG00000247796 AllianceGenome:HGNC:27417
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 1.8), thyroid (RPKM 1.8) and 24 other tissues See more
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Genomic context

See MOCS2-DT in Genome Data Viewer
Location:
5q11.2
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (53109842..53115126)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (53937628..53942912)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (52405672..52410956)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha 2 Neighboring gene uncharacterized LOC124900974 Neighboring gene molybdenum cofactor synthesis 2 Neighboring gene CRISPRi-validated cis-regulatory element chr5.1275 Neighboring gene CRISPRi-validated cis-regulatory element chr5.1276

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study identifies three novel susceptibility loci for severe Acne vulgaris.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_034107.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC008966
    Related
    ENST00000502171.2
  2. NR_104654.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AK097893, BQ637503, DA398674, DR158823, HY215522
    Related
    ENST00000667672.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    53109842..53115126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    53937628..53942912
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)