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CCDC96 coiled-coil domain containing 96 [ Homo sapiens (human) ]

Gene ID: 257236, updated on 11-Jun-2021

Summary

Official Symbol
CCDC96provided by HGNC
Official Full Name
coiled-coil domain containing 96provided by HGNC
Primary source
HGNC:HGNC:26900
See related
Ensembl:ENSG00000173013 MIM:619347
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
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Genomic context

See CCDC96 in Genome Data Viewer
Location:
4p16.1
Exon count:
1
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (7040849..7043001, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (7042576..7044728, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene KIAA0232 Neighboring gene TBC1 domain family member 14 Neighboring gene RN7SK pseudogene 292 Neighboring gene uncharacterized LOC100129931 Neighboring gene uncharacterized LOC105374368 Neighboring gene transcriptional adaptor 2B Neighboring gene GrpE like 1, mitochondrial

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ90575, MGC138479

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in axoneme IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in ciliary basal body IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
coiled-coil domain-containing protein 96

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153376.3NP_699207.1  coiled-coil domain-containing protein 96

    See identical proteins and their annotated locations for NP_699207.1

    Status: VALIDATED

    Source sequence(s)
    AC097382
    Consensus CDS
    CCDS3395.1
    UniProtKB/Swiss-Prot
    Q2M329
    Related
    ENSP00000309285.4, ENST00000310085.6
    Conserved Domains (1) summary
    pfam13870
    Location:365541
    DUF4201; Domain of unknown function (DUF4201)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    7040849..7043001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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