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HEATR9 HEAT repeat containing 9 [ Homo sapiens (human) ]

Gene ID: 256957, updated on 11-Jun-2021

Summary

Official Symbol
HEATR9provided by HGNC
Official Full Name
HEAT repeat containing 9provided by HGNC
Primary source
HGNC:HGNC:26548
See related
Ensembl:ENSG00000270379
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C17orf66
Expression
Restricted expression toward testis (RPKM 5.0) See more
Orthologs
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Genomic context

See HEATR9 in Genome Data Viewer
Location:
17q12
Exon count:
16
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (35854946..35868891, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (34181959..34195895, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985067 Neighboring gene chromosome 17 open reading frame 50 Neighboring gene matrix metallopeptidase 28 Neighboring gene TATA-box binding protein associated factor 15 Neighboring gene probable ribosome biogenesis protein RLP24 Neighboring gene uncharacterized LOC105371744 Neighboring gene uncharacterized LOC105371745 Neighboring gene C-C motif chemokine ligand 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ32830

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
protein HEATR9
Names
HEAT repeat-containing protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001321395.2NP_001308324.1  protein HEATR9 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK057392, AK301943, DB090576
    Consensus CDS
    CCDS82108.1
    UniProtKB/Swiss-Prot
    A2RTY3
    Related
    ENSP00000473760.1, ENST00000603870.5
    Conserved Domains (1) summary
    pfam13646
    Location:334421
    HEAT_2; HEAT repeats
  2. NM_152781.4NP_689994.2  protein HEATR9 isoform 1

    See identical proteins and their annotated locations for NP_689994.2

    Status: VALIDATED

    Source sequence(s)
    AK057392, BC033734, BX114438, DB090576
    Consensus CDS
    CCDS11299.1
    UniProtKB/Swiss-Prot
    A2RTY3
    Related
    ENSP00000473941.1, ENST00000604834.6
    Conserved Domains (1) summary
    pfam13646
    Location:374461
    HEAT_2; HEAT repeats

RNA

  1. NR_135630.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK057392, AK301943, BC144011, DB090576
    Related
    ENST00000603323.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    35854946..35868891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005278235.1XP_005278292.1  protein HEATR9 isoform X3

    See identical proteins and their annotated locations for XP_005278292.1

    Conserved Domains (1) summary
    pfam13646
    Location:300387
    HEAT_2; HEAT repeats
  2. XM_005278233.2XP_005278290.1  protein HEATR9 isoform X1

    See identical proteins and their annotated locations for XP_005278290.1

    Conserved Domains (1) summary
    pfam13646
    Location:340427
    HEAT_2; HEAT repeats
  3. XM_011524586.2XP_011522888.1  protein HEATR9 isoform X1

    See identical proteins and their annotated locations for XP_011522888.1

    Conserved Domains (1) summary
    pfam13646
    Location:340427
    HEAT_2; HEAT repeats
  4. XM_006721802.3XP_006721865.1  protein HEATR9 isoform X4

    See identical proteins and their annotated locations for XP_006721865.1

    Conserved Domains (1) summary
    pfam13646
    Location:192279
    HEAT_2; HEAT repeats
  5. XM_017024424.2XP_016879913.1  protein HEATR9 isoform X2

RNA

  1. XR_254513.3 RNA Sequence

  2. XR_934433.1 RNA Sequence

  3. XR_934432.3 RNA Sequence

  4. XR_934434.1 RNA Sequence

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187614.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    89487..103423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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