NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_017034.2 RefSeqGene
- Range
-
5000..250922
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001277176.2 → NP_001264105.1 WD repeat-containing protein 72 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains multiple differences, compared to variant 1, including the lack of multiple 5' coding exons. It represents use of an internal promoter. The encoded isoform (b) is shorter and has a distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AC066614, AK310211, CK299278, DA748816
- Consensus CDS
-
CCDS73730.1
- UniProtKB/TrEMBL
-
A0A087WTC3
- Related
- ENSP00000477754.1, ENST00000614174.4
-
NM_182758.4 → NP_877435.3 WD repeat-containing protein 72 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AC066611, AC066614, AK096055, BC101614, BX537884, CK299278
- Consensus CDS
-
CCDS10151.1
- UniProtKB/Swiss-Prot
- Q3MJ13, Q7Z3I3, Q8N8X2
- UniProtKB/TrEMBL
-
H0YLX4
- Related
- ENSP00000353699.5, ENST00000360509.10
- Conserved Domains (3) summary
-
- COG2319
Location:404 → 596
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:20 → 60
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:404 → 595
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
RNA
-
NR_102334.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' exon, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC066611, AC066614, BC101614, BX648571, CK299278
-
NR_102335.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) contains multiple differences, compared to variant 1, including the lack of multiple 5' exons. It represents use of an internal promoter. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC066614, AK310211, CK299278
- Related
-
ENST00000567224.1
-
NR_102336.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC066614, CK299278, DA736178
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000015.10 Reference GRCh38.p14 Primary Assembly
- Range
-
53513741..53762878 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011521436.3 → XP_011519738.1 WD repeat-containing protein 72 isoform X2
- UniProtKB/TrEMBL
-
H0YLX4
- Conserved Domains (3) summary
-
- COG2319
Location:404 → 590
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:20 → 60
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:404 → 589
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047432344.1 → XP_047288300.1 WD repeat-containing protein 72 isoform X1
- UniProtKB/Swiss-Prot
- Q3MJ13, Q7Z3I3, Q8N8X2
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_047432343.1 → XP_047288299.1 WD repeat-containing protein 72 isoform X1
- UniProtKB/Swiss-Prot
- Q3MJ13, Q7Z3I3, Q8N8X2
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_047432345.1 → XP_047288301.1 WD repeat-containing protein 72 isoform X3
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_047432342.1 → XP_047288298.1 WD repeat-containing protein 72 isoform X1
- UniProtKB/Swiss-Prot
- Q3MJ13, Q7Z3I3, Q8N8X2
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_017022061.2 → XP_016877550.1 WD repeat-containing protein 72 isoform X1
- UniProtKB/Swiss-Prot
- Q3MJ13, Q7Z3I3, Q8N8X2
- UniProtKB/TrEMBL
-
H0YLX4
- Conserved Domains (3) summary
-
- COG2319
Location:404 → 596
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:20 → 60
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:404 → 595
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060939.1 Alternate T2T-CHM13v2.0
- Range
-
51323311..51572387 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054377676.1 → XP_054233651.1 WD repeat-containing protein 72 isoform X3
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_054377675.1 → XP_054233650.1 WD repeat-containing protein 72 isoform X2
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_054377672.1 → XP_054233647.1 WD repeat-containing protein 72 isoform X1
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_054377673.1 → XP_054233648.1 WD repeat-containing protein 72 isoform X1
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_054377671.1 → XP_054233646.1 WD repeat-containing protein 72 isoform X1
- UniProtKB/TrEMBL
-
H0YLX4
-
XM_054377674.1 → XP_054233649.1 WD repeat-containing protein 72 isoform X1
- UniProtKB/TrEMBL
-
H0YLX4