U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CDRT15L2 CMT1A duplicated region transcript 15 like 2 [ Homo sapiens (human) ]

Gene ID: 256223, updated on 17-Jun-2024

Summary

Official Symbol
CDRT15L2provided by HGNC
Official Full Name
CMT1A duplicated region transcript 15 like 2provided by HGNC
Primary source
HGNC:HGNC:34075
See related
Ensembl:ENSG00000214819 AllianceGenome:HGNC:34075
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis (RPKM 4.8) See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CDRT15L2 in Genome Data Viewer
Location:
17p11.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (20579724..20580911)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (20528374..20529561)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (20483037..20484224)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene COTL1 pseudogene 2 Neighboring gene uncharacterized LOC105371580 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:20482200-20483198 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:20487547-20488084 Neighboring gene zinc finger SWIM-type containing 5 pseudogene 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:20489421-20489620 Neighboring gene Meis homeobox 3 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
CMT1A duplicated region transcript 15 protein-like protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001190790.2NP_001177719.1  CMT1A duplicated region transcript 15 protein-like protein

    See identical proteins and their annotated locations for NP_001177719.1

    Status: VALIDATED

    Source sequence(s)
    AA446206, AI016778
    Consensus CDS
    CCDS54096.1
    UniProtKB/Swiss-Prot
    A8MXV6
    Related
    ENSP00000382000.1, ENST00000399044.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    20579724..20580911
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    20528374..20529561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)