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INAFM1 InaF motif containing 1 [ Homo sapiens (human) ]

Gene ID: 255783, updated on 23-Nov-2021

Summary

Official Symbol
INAFM1provided by HGNC
Official Full Name
InaF motif containing 1provided by HGNC
Primary source
HGNC:HGNC:27406
See related
Ensembl:ENSG00000257704
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRR24
Expression
Ubiquitous expression in adrenal (RPKM 12.5), endometrium (RPKM 9.8) and 25 other tissues See more
Orthologs
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Genomic context

See INAFM1 in Genome Data Viewer
Location:
19q13.32
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (47274423..47275723)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (47777680..47778980)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated cis-regulatory element chr19.5064 Neighboring gene coiled-coil domain containing 9 Neighboring gene CRISPRi-validated cis-regulatory element chr19.5070 Neighboring gene uncharacterized LOC105372427

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
putative transmembrane protein INAFM1
Names
inaF-motif-containing protein 1
proline rich 24
proline-rich protein 24

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178511.6NP_848606.3  putative transmembrane protein INAFM1

    See identical proteins and their annotated locations for NP_848606.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) is intronless and encodes a 195aa protein.
    Source sequence(s)
    BC022076, BC064510
    Consensus CDS
    CCDS46131.1
    UniProtKB/Swiss-Prot
    C9JVW0
    Related
    ENSP00000447679.1, ENST00000552360.4
    Conserved Domains (1) summary
    pfam15018
    Location:2558
    InaF-motif; TRP-interacting helix

RNA

  1. NR_037675.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal segment and does not have an in-frame coding region, as compared to variant 1. The transcript does not appear to encode a protein.
    Source sequence(s)
    BC064510, BQ708656

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    47274423..47275723
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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