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LOC25486618 polyubiquitin 9 [ Medicago truncatula (barrel medic) ]

Gene ID: 25486618, updated on 8-Apr-2025
Gene symbol
LOC25486618
Gene description
polyubiquitin 9
Locus tag
MtrunA17_Chr2g0302641
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2025_04 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (20249890..20253072, complement)

Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene probable receptor-like protein kinase At5g18500 Neighboring gene uncharacterized LOC25486617 Neighboring gene uncharacterized LOC120578182 Neighboring gene uncharacterized LOC25486621

Genomic Sequence:
NC_053043.1 Chromosome 2 Reference MtrunA17r5.0-ANR Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Expression dynamics of the Medicago truncatula transcriptome during the symbiotic interaction with Sinorhizobium meliloti: which role for nitric oxide? Boscari A, et al. Plant Physiol, 2013 Jan. PMID 23136381, Free PMC Article
  2. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
polyubiquitin 9
Names
ubiquitin family protein

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RefSeqs of Annotated Genomes: GCF_003473485.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    20249890..20253072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013608235.3 → XP_013463689.1  polyubiquitin 9

    UniProtKB/TrEMBL
    B7FMQ0
    Conserved Domains (2) summary
    smart00213
    Location:3 → 75
    UBQ; Ubiquitin homologues
    cl00155
    Location:1 → 86
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
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