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LOC25485515 dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [ Medicago truncatula (barrel medic) ]

Gene ID: 25485515, updated on 7-Dec-2023

Summary

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Gene symbol
LOC25485515
Gene description
dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic
Locus tag
MtrunA17_Chr1g0210021
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC25485515 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 1 NC_053042.1 (53883544..53889609)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 1 NC_016407.2 (50194259..50200307)

Chromosome 1 - NC_053042.1Genomic Context describing neighboring genes Neighboring gene ACD11 homolog protein Neighboring gene exocyst complex component EXO84A Neighboring gene uncharacterized LOC25485516 Neighboring gene geranylgeranyl transferase type-2 subunit beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression dynamics of the Medicago truncatula transcriptome during the symbiotic interaction with Sinorhizobium meliloti: which role for nitric oxide? Boscari A, et al. Plant Physiol, 2013 Jan. PMID 23136381, Free PMC Article
  2. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dihydrolipoyllysine-residue acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from pyruvate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in chloroplast thylakoid IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of pyruvate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic
Names
2-oxoacid dehydrogenase acyltransferase family protein
putative dihydrolipoyllysine-residue acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053042.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    53883544..53889609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013614745.3 → XP_013470199.1  dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic

    UniProtKB/TrEMBL
    A0A072VR15
    Conserved Domains (1) summary
    PRK11856
    Location:48 → 470
    PRK11856; branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Nucleotide Protein
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