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Gpr1 G protein-coupled receptor 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 25457, updated on 27-Feb-2020

Summary

Official Symbol
Gpr1provided by RGD
Official Full Name
G protein-coupled receptor 1provided by RGD
Primary source
RGD:2728
See related
Ensembl:ENSRNOG00000045532
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
G-protein-coupled orphan receptor [RGD, Feb 2006]
Expression
Biased expression in Muscle (RPKM 5.5), Heart (RPKM 1.5) and 5 other tissues See more
Orthologs

Genomic context

See Gpr1 in Genome Data Viewer
Location:
9q32
Exon count:
3
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (69958607..69991410, complement)
106 current Rn_Celera (GCF_000002265.2) 9 AC_000077.1 (62003626..62004687, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 9 NC_005108.3 (69767734..69800172, complement)

Chromosome 9 - NC_005108.4Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase core subunit S1 Neighboring gene eukaryotic translation elongation factor 1 beta 2 Neighboring gene zinc finger, DBF-type containing 2 Neighboring gene ADAM metallopeptidase domain 23

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
neuropeptide binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
peptide binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
G-protein coupled receptor 1
Names
G-protein copled receptor 1
probable G-protein coupled receptor 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012961.1NP_037093.1  G-protein coupled receptor 1

    See identical proteins and their annotated locations for NP_037093.1

    Status: PROVISIONAL

    Source sequence(s)
    S74702
    UniProtKB/Swiss-Prot
    P46090
    Related
    ENSRNOP00000067327.1, ENSRNOT00000072737.1
    Conserved Domains (1) summary
    pfam00001
    Location:55302
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005108.4 Reference Rnor_6.0 Primary Assembly

    Range
    69958607..69991410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017596285.1XP_017451774.1  G-protein coupled receptor 1 isoform X1

    UniProtKB/TrEMBL
    M0RCK7
    Conserved Domains (1) summary
    pfam00001
    Location:55302
    7tm_1; 7 transmembrane receptor (rhodopsin family)
  2. XM_008767077.2XP_008765299.1  G-protein coupled receptor 1 isoform X1

    See identical proteins and their annotated locations for XP_008765299.1

    UniProtKB/TrEMBL
    M0RCK7
    Conserved Domains (1) summary
    pfam00001
    Location:55302
    7tm_1; 7 transmembrane receptor (rhodopsin family)

Alternate Rn_Celera

Genomic

  1. AC_000077.1 Alternate Rn_Celera

    Range
    62003626..62004687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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