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PROSER2 proline and serine rich 2 [ Homo sapiens (human) ]

Gene ID: 254427, updated on 21-Dec-2019

Summary

Official Symbol
PROSER2provided by HGNC
Official Full Name
proline and serine rich 2provided by HGNC
Primary source
HGNC:HGNC:23728
See related
Ensembl:ENSG00000148426
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C10orf47
Expression
Broad expression in liver (RPKM 3.3), placenta (RPKM 2.8) and 23 other tissues See more
Orthologs

Genomic context

See PROSER2 in Genome Data Viewer
Location:
10p14
Exon count:
5
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (11823341..11872277)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (11865295..11914276)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379850 Neighboring gene uncharacterized LOC105376415 Neighboring gene PROSER2 antisense RNA 1 Neighboring gene RNA, U6 small nuclear 1095, pseudogene Neighboring gene UPF2 regulator of nonsense mediated mRNA decay Neighboring gene uncharacterized LOC105376416

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC35403

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
proline and serine-rich protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153256.4NP_694988.3  proline and serine-rich protein 2

    See identical proteins and their annotated locations for NP_694988.3

    Status: VALIDATED

    Source sequence(s)
    AL138898, BC048800
    Consensus CDS
    CCDS7085.1
    UniProtKB/Swiss-Prot
    Q86WR7
    Related
    ENSP00000277570.5, ENST00000277570.10
    Conserved Domains (2) summary
    PHA03247
    Location:92405
    PHA03247; large tegument protein UL36; Provisional
    pfam15385
    Location:396433
    SARG; Specifically androgen-regulated gene protein

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    11823341..11872277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011519438.2XP_011517740.1  proline and serine-rich protein 2 isoform X1

    See identical proteins and their annotated locations for XP_011517740.1

    UniProtKB/Swiss-Prot
    Q86WR7
    Conserved Domains (2) summary
    PHA03247
    Location:92405
    PHA03247; large tegument protein UL36; Provisional
    pfam15385
    Location:396433
    SARG; Specifically androgen-regulated gene protein
  2. XM_017016028.2XP_016871517.1  proline and serine-rich protein 2 isoform X1

    UniProtKB/Swiss-Prot
    Q86WR7
    Conserved Domains (2) summary
    PHA03247
    Location:92405
    PHA03247; large tegument protein UL36; Provisional
    pfam15385
    Location:396433
    SARG; Specifically androgen-regulated gene protein
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