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rad55 DNA recombination mediator, RecA family ATPase Rad55/Rhp55 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543685, updated on 22-Jun-2024

Summary

Gene symbol
rad55
Gene description
DNA recombination mediator, RecA family ATPase Rad55/Rhp55
Locus tag
SPOM_SPAC3C7.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
rhp55
Old locus tag
SPAC3C7.03c
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Genomic context

See rad55 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (2066442..2067914, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene eisosome BAR domain-containing protein Pil2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding ISM
Inferred from Sequence Model
more info
 
enables ATP hydrolysis activity NAS
Non-traceable Author Statement
more info
 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to crossover junction DNA endonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
 
contributes_to four-way junction DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in DNA strand invasion TAS
Traceable Author Statement
more info
PubMed 
involved_in double-strand break repair via homologous recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in meiotic DNA recombinase assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in meiotic joint molecule formation TAS
Traceable Author Statement
more info
PubMed 
involved_in reciprocal meiotic recombination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in reciprocal meiotic recombination IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in reciprocal meiotic recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of Rad51C-XRCC3 complex IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in replication fork IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in site of double-strand break IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
DNA recombination mediator, RecA family ATPase Rad55/Rhp55

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2066442..2067914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019035.3NP_593604.1  DNA recombination mediator, RecA family ATPase Rad55/Rhp55 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593604.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14129
    Conserved Domains (2) summary
    COG0468
    Location:1295
    RecA; RecA/RadA recombinase [Replication, recombination and repair]
    cl21455
    Location:29327
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases