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SPAC4G8.09 putative leucine--tRNA (Leu) ligase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543476, updated on 9-Sep-2018

Summary

Gene symbol
SPAC4G8.09
Gene description
putative leucine--tRNA (Leu) ligase
Locus tag
SPAC4G8.09
Gene type
protein coding
RNA name
putative leucine--tRNA (Leu) ligase
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

Genomic context

See SPAC4G8.09 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (778431..781324)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene putative mitochondrial iron ion transporter Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene putative F1-F0 ATPase assembly protein Neighboring gene putative SNARE protein Gos1 Neighboring gene putative alpha-1,2-mannosyltransferase

Pathways from BioSystems

General gene information

Homology

  • Homologs of the SPAC4G8.09 gene: The SPAC4G8.09 gene is conserved in human, chimpanzee, Rhesus monkey, dog, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, A.thaliana, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
ATP binding ISM
Inferred from Sequence Model
more info
 
aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 
leucine-tRNA ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
leucine-tRNA ligase activity ISO
Inferred from Sequence Orthology
more info
 
mRNA binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
Group I intron splicing ISO
Inferred from Sequence Orthology
more info
 
leucyl-tRNA aminoacylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
leucyl-tRNA aminoacylation ISO
Inferred from Sequence Orthology
more info
 
mitochondrial translation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial translation NAS
Non-traceable Author Statement
more info
 
Component Evidence Code Pubs
mitochondrial matrix IC
Inferred by Curator
more info
 
mitochondrion HDA PubMed 
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
putative leucine--tRNA (Leu) ligase
NP_593069.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    778431..781324
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018467.2NP_593069.1  putative leucine--tRNA (Leu) ligase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593069.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09828
    Conserved Domains (4) summary
    cd00812
    Location:59667
    LeuRS_core; catalytic core domain of leucyl-tRNA synthetases
    PRK00390
    Location:33872
    leuS; leucyl-tRNA synthetase; Validated
    pfam13603
    Location:247414
    tRNA-synt_1_2; Leucyl-tRNA synthetase, Domain 2
    cl12020
    Location:667791
    Anticodon_Ia_like; Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains
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