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mrc1 claspin [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543240, updated on 18-Sep-2024

Summary

Official Symbol
mrc1
Official Full Name
claspin
Primary source
PomBase:SPAC694.06c
Locus tag
SPOM_SPAC694.06C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See mrc1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4209203..4212388, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene nicotinamide-nucleotide adenylyltransferase Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 40S ribosomal protein eS25 Neighboring gene ncRNA Neighboring gene transcription elongation factor Spt6 Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 3'-flap-structured DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables D-loop DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables Y-form DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables anaphase-promoting complex binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables bubble DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables double-stranded DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling adaptor activity IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in chromatin IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in chromatin IMP
Inferred from Mutant Phenotype
more info
PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
part_of replication fork protection complex ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4209203..4212388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019915.3NP_594486.1  claspin [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594486.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P7T4
    UniProtKB/TrEMBL
    S6B6U0
    Conserved Domains (1) summary
    pfam09444
    Location:701837
    MRC1; MRC1-like domain