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rps1101 40S ribosomal protein S11 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543120, updated on 5-Aug-2018

Summary

Gene symbol
rps1101
Gene description
40S ribosomal protein S11
Locus tag
SPAC31G5.03
Gene type
protein coding
RNA name
40S ribosomal protein S11
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
rps11-1

Genomic context

See rps1101 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2992622..2993240)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene L-lactate dehydrogenase (cytochrome) Neighboring gene putative transcription factor Neighboring gene U2 snRNP-associated RNA-binding protein Sap49 Neighboring gene putative chaperone Rot1 Neighboring gene miscRNA Neighboring gene homoisocitrate dehydrogenase Neighboring gene putative ribulose phosphate 3-epimerase Neighboring gene miscRNA Neighboring gene putative protein Rgg8

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
rRNA binding IEA
Inferred from Electronic Annotation
more info
 
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cytoplasmic translation ISO
Inferred from Sequence Orthology
more info
 
ribosome biogenesis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytosol HDA PubMed 
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosolic small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
nucleus HDA PubMed 

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2992622..2993240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019429.2NP_594003.1  40S ribosomal protein S11 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594003.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CT73, P0CT74
    Conserved Domains (3) summary
    COG0186
    Location:59142
    RpsQ; Ribosomal protein S17 [Translation, ribosomal structure and biogenesis]
    PTZ00241
    Location:7152
    PTZ00241; 40S ribosomal protein S11; Provisional
    pfam16205
    Location:868
    Ribosomal_S17_N; Ribosomal_S17 N-terminal
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