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LINC00710 long intergenic non-protein coding RNA 710 [ Homo sapiens (human) ]

Gene ID: 254312, updated on 23-Nov-2021

Summary

Official Symbol
LINC00710provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 710provided by HGNC
Primary source
HGNC:HGNC:27386
See related
Ensembl:ENSG00000229240
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 11.9) See more
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Genomic context

See LINC00710 in Genome Data Viewer
Location:
10p14
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (10934940..10952163, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (10976903..10994126, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene CUGBP Elav-like family member 2 Neighboring gene surfactant associated 1, lncRNA Neighboring gene uncharacterized LOC105376405 Neighboring gene CELF2 antisense RNA 2 Neighboring gene Sharpr-MPRA regulatory region 4729

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015413.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) is the longest transcript.
    Source sequence(s)
    BC033338, DB038073
    Related
    ENST00000618245.5
  2. NR_024410.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon, as compared to variant 1.
    Source sequence(s)
    BC033338, DB038073
    Related
    ENST00000653692.1
  3. NR_024411.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks two internal exons, as compared to variant 1.
    Source sequence(s)
    BC033338, BC113009, DB038073
    Related
    ENST00000635670.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    10934940..10952163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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