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SPAC1486.01 putative manganese superoxide dismutase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542886, updated on 12-Aug-2018

Summary

Gene symbol
SPAC1486.01
Gene description
putative manganese superoxide dismutase
Locus tag
SPAC1486.01
Gene type
protein coding
RNA name
putative manganese superoxide dismutase
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

Genomic context

See SPAC1486.01 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (3185314..3186584)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative 3-oxoacyl-[acyl-carrier-protein] reductase Oar2 Neighboring gene Clp1-interacting protein Nsk1 Neighboring gene UBA domain protein Ucp14 Neighboring gene putative RNA-binding splicing factor Neighboring gene miscRNA Neighboring gene medial ring protein Alm1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the SPAC1486.01 gene: The SPAC1486.01 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
manganese ion binding IDA
Inferred from Direct Assay
more info
PubMed 
metal ion binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
superoxide dismutase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
superoxide dismutase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
age-dependent response to oxidative stress involved in chronological cell aging IMP
Inferred from Mutant Phenotype
more info
PubMed 
aging IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
removal of superoxide radicals IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
mitochondrial matrix ISO
Inferred from Sequence Orthology
more info
 
mitochondrion HDA PubMed 
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
putative manganese superoxide dismutase
NP_594089.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3185314..3186584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019513.2NP_594089.1  putative manganese superoxide dismutase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594089.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UQX0
    UniProtKB/TrEMBL
    D7UTC9
    Conserved Domains (3) summary
    COG0605
    Location:23218
    SodA; Superoxide dismutase [Inorganic ion transport and metabolism]
    pfam00081
    Location:27104
    Sod_Fe_N; Iron/manganese superoxide dismutases, alpha-hairpin domain
    pfam02777
    Location:116214
    Sod_Fe_C; Iron/manganese superoxide dismutases, C-terminal domain
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