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sod2 manganese superoxide dismutase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542886, updated on 18-Sep-2024

Summary

Official Symbol
sod2
Official Full Name
manganese superoxide dismutase
Primary source
PomBase:SPAC1486.01
Locus tag
SPOM_SPAC1486.01
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See sod2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (3185332..3186584)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Golgi Dsc E3 ligase complex transmembrane subunit, C-terminal UBA domain Dsc2 Neighboring gene ncRNA Neighboring gene RNA-binding splicing factor

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables manganese ion binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables manganese ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables superoxide dismutase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables superoxide dismutase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in removal of superoxide radicals IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in mitochondrial matrix ISO
Inferred from Sequence Orthology
more info
 
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
manganese superoxide dismutase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3185332..3186584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019513.3NP_594089.1  manganese superoxide dismutase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594089.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UQX0
    UniProtKB/TrEMBL
    D7UTC9
    Conserved Domains (3) summary
    COG0605
    Location:23218
    SodA; Superoxide dismutase [Inorganic ion transport and metabolism]
    pfam00081
    Location:27104
    Sod_Fe_N; Iron/manganese superoxide dismutases, alpha-hairpin domain
    pfam02777
    Location:116214
    Sod_Fe_C; Iron/manganese superoxide dismutases, C-terminal domain