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gcn5 SAGA complex histone acetyltransferase catalytic subunit Gcn5 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542513, updated on 6-May-2021

Summary

Gene symbol
gcn5
Gene description
SAGA complex histone acetyltransferase catalytic subunit Gcn5
Locus tag
SPAC1952.05
Gene type
protein coding
RNA name
SAGA complex histone acetyltransferase catalytic subunit Gcn5
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
kat2
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Genomic context

See gcn5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4973601..4975698)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene OUT family ubiquitin-specific cysteine protease Otu2 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene putative pyridoxamine 5'-phosphate oxidase Neighboring gene checkpoint clamp complex protein Rad1 Neighboring gene miscRNA Neighboring gene putative acetyl-CoA hydrolase

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the gcn5 gene: The gcn5 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, and frog.

Gene Ontology Provided by PomBase

Component Evidence Code Pubs
part_of SAGA complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of SAGA complex IPI
Inferred from Physical Interaction
more info
PubMed 
is_active_in chromatin IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus HDA PubMed 
is_active_in pericentric heterochromatin EXP
Inferred from Experiment
more info
PubMed 

General protein information

Preferred Names
SAGA complex histone acetyltransferase catalytic subunit Gcn5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4973601..4975698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020236.2NP_594807.1  SAGA complex histone acetyltransferase catalytic subunit Gcn5 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594807.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UUK2
    Conserved Domains (3) summary
    cd05509
    Location:347446
    Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
    COG5076
    Location:95454
    COG5076; Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
    pfam00583
    Location:170245
    Acetyltransf_1; Acetyltransferase (GNAT) family
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