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SPAC17G8.06c putative dihydroxy-acid dehydratase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542155, updated on 11-Apr-2024

Summary

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Gene symbol
SPAC17G8.06c
Gene description
putative dihydroxy-acid dehydratase
Primary source
PomBase:SPAC17G8.06c
Locus tag
SPAC17G8.06c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SPAC17G8.06c in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2351150..2353472, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative uridine ribohydrolase Neighboring gene DNA polymerase epsilon subunit Dpb3 Neighboring gene histone-fold domain-containing protein Neighboring gene ARP2/3 actin-organizing complex subunit Arc5 Neighboring gene mediator complex subunit Med20 Neighboring gene GDT1-like protein Neighboring gene YEATS family histone acetyltransferase subunit Yaf9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Response to leucine in Schizosaccharomyces pombe (fission yeast). Ohtsuka H, et al. FEMS Yeast Res, 2022 Apr 26. PMID 35325114, Free PMC Article
  2. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  3. SIN-inhibitory phosphatase complex promotes Cdc11p dephosphorylation and propagates SIN asymmetry in fission yeast. Singh NS, et al. Curr Biol, 2011 Dec 6. PMID 22119525, Free PMC Article
  4. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
  5. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables dihydroxy-acid dehydratase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables dihydroxy-acid dehydratase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in branched-chain amino acid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in isoleucine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in valine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
putative dihydroxy-acid dehydratase
NP_593729.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2351150..2353472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019160.2 → NP_593729.1  putative dihydroxy-acid dehydratase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593729.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P78903, Q10318
    Conserved Domains (1) summary
    PRK00911
    Location:39 → 596
    PRK00911; dihydroxy-acid dehydratase; Provisional
Nucleotide Protein
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