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rcd1 CCR4-NOT complex subunit Rcd1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542094, updated on 22-Jun-2024

Summary

Gene symbol
rcd1
Gene description
CCR4-NOT complex subunit Rcd1
Locus tag
SPOM_SPAC29B12.06C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
not9
Old locus tag
SPAC29B12.06c
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Genomic context

See rcd1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (5417366..5419173, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pyridoxal 5'-phosphate synthase (glutamine hydrolyzing) Neighboring gene ncRNA Neighboring gene S-adenosylmethionine-dependent methyltransferase Neighboring gene ncRNA Neighboring gene multidomain vesicle coat component Sec16 Neighboring gene ncRNA Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA binding NAS
Non-traceable Author Statement
more info
 
Process Evidence Code Pubs
involved_in negative regulation of translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nuclear-transcribed mRNA poly(A) tail shortening IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of CCR4-NOT core complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of CCR4-NOT core complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of Mei2 nuclear dot complex IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in P-body IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasm HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

Preferred Names
CCR4-NOT complex subunit Rcd1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5417366..5419173 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020415.3NP_594984.1  CCR4-NOT complex subunit Rcd1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594984.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q92368
    Conserved Domains (1) summary
    cl02160
    Location:1280
    Rcd1; Cell differentiation family, Rcd1-like