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pof11 F-box protein Pof11 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541707, updated on 4-Dec-2018

Summary

Gene symbol
pof11
Gene description
F-box protein Pof11
Locus tag
SPAC29E6.01
Gene type
protein coding
RNA name
F-box protein Pof11
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
mug156; SPAC30.05

Genomic context

See pof11 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (4401733..4403868)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene glutathione S-conjugate-exporting ATPase Abc4 Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene putative U4/U5/U6 small nuclear ribonucleoprotein complex subunit Prp3 Neighboring gene putative tethering factor Uso1 Neighboring gene putative peptide methionine sulfoxide reductase Neighboring gene kinetochore protein Nnf1

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein binding, bridging ISM
Inferred from Sequence Model
more info
 
Component Evidence Code Pubs
Pwp2p-containing subcomplex of 90S preribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
SCF ubiquitin ligase complex ISM
Inferred from Sequence Model
more info
 
cytosol HDA PubMed 
small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4401733..4403868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019988.2NP_594559.1  F-box protein Pof11 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594559.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09855
    Conserved Domains (4) summary
    COG2319
    Location:206501
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:222496
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12937
    Location:77119
    F-box-like; F-box-like
    sd00039
    Location:224259
    7WD40; WD40 repeat [structural motif]
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