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pli1 SUMO E3 ligase Pli1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541580, updated on 6-May-2021

Summary

Gene symbol
pli1
Gene description
SUMO E3 ligase Pli1
Primary source
PomBase:SPAC1687.05
Locus tag
SPAC1687.05
Gene type
protein coding
RNA name
SUMO E3 ligase Pli1
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See pli1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (908736..911854)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative CAAX prenyl protease Neighboring gene putative DNA replication factor C complex subunit Rfc4 Neighboring gene miscRNA Neighboring gene mini-chromosome maintenance complex-binding protein mcb1 Neighboring gene ribosomal L28e protein family domain-containing protein Neighboring gene 5S ribosomal RNA Neighboring gene hypothetical protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables SUMO ligase activity EXP
Inferred from Experiment
more info
PubMed 
enables SUMO ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables SUMO ligase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in interstrand cross-link repair IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in linear element assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of DNA strand resection involved in replication fork processing IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of double-strand break repair via homologous recombination IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in protein sumoylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein sumoylation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in protein sumoylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in reciprocal meiotic recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of mitotic chromosome condensation EXP
Inferred from Experiment
more info
PubMed 
involved_in regulation of mitotic recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of reciprocal meiotic recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of telomere maintenance via recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in replication fork processing IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in stalled replication fork localization to nuclear periphery IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus HDA PubMed 
is_active_in site of double-strand break IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    908736..911854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018519.2NP_593123.1  SUMO E3 ligase Pli1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593123.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94451
    Conserved Domains (3) summary
    pfam02037
    Location:2152
    SAP; SAP domain
    pfam02891
    Location:301347
    zf-MIZ; MIZ/SP-RING zinc finger
    pfam14324
    Location:119251
    PINIT; PINIT domain
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