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ubi3 ubiquitin-40S ribosomal protein S31 fusion protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541445, updated on 6-May-2021

Summary

Gene symbol
ubi3
Gene description
ubiquitin-40S ribosomal protein S31 fusion protein
Primary source
PomBase:SPAC6G10.11c
Locus tag
SPAC6G10.11c
Gene type
protein coding
RNA name
ubiquitin-40S ribosomal protein S31 fusion protein
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See ubi3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (3237895..3238422, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative nuclear cap-binding complex large subunit Neighboring gene putative isocitrate dehydrogenase Idp1 Neighboring gene putative alpha glucosidase I Gls1 Neighboring gene hypothetical protein Neighboring gene miscRNA Neighboring gene transcription factor Ace2 Neighboring gene hypothetical protein Neighboring gene putative RNA-binding protein Nop9

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the ubi3 gene: The ubi3 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein tag IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
 
enables ubiquitin protein ligase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation ISO
Inferred from Sequence Orthology
more info
 
involved_in modification-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in ribosome biogenesis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in cytosol HDA PubMed 
part_of cytosolic small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
ubiquitin-40S ribosomal protein S31 fusion protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3237895..3238422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019532.2NP_594108.1  ubiquitin-40S ribosomal protein S31 fusion protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594108.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0C016
    Conserved Domains (3) summary
    cd01803
    Location:176
    Ubiquitin; Ubiquitin
    smart00213
    Location:171
    UBQ; Ubiquitin homologues
    pfam01599
    Location:103145
    Ribosomal_S27; Ribosomal protein S27a
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