U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sap114 U2 snRNP-associated protein Sap114 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541437, updated on 22-Jun-2024

Summary

Gene symbol
sap114
Gene description
U2 snRNP-associated protein Sap114
Locus tag
SPOM_SPAC22A12.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPAC22A12.09c
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See sap114 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003424.3 (1172351..1174448, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ER membrane protein O-mannosyltransferase Ogm1 Neighboring gene cardiolipin synthase/ hydrolase fusion protein Crd1;mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein Neighboring gene ncRNA Neighboring gene CDP-alcohol phosphatidyltransferase class-I family protein Neighboring gene dihydroxyacetone kinase Dak1 Neighboring gene exosome subunit Rrp40

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in mRNA splicing, via spliceosome EXP
Inferred from Experiment
more info
PubMed 
Component Evidence Code Pubs
part_of U2 snRNP IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of U2 snRNP IDA
Inferred from Direct Assay
more info
PubMed 
part_of U2-type prespliceosome IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of catalytic step 2 spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus HDA PubMed 

General protein information

Preferred Names
U2 snRNP-associated protein Sap114

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1172351..1174448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018636.3NP_593239.1  U2 snRNP-associated protein Sap114 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593239.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13900
    Conserved Domains (3) summary
    smart00648
    Location:4295
    SWAP; Suppressor-of-White-APricot splicing regulator
    pfam11928
    Location:306367
    DUF3446; Domain of unknown function (DUF3446)
    pfam12230
    Location:211441
    PRP21_like_P; Pre-mRNA splicing factor PRP21 like protein