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SPBC947.06c putative spermidine family transporter [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541275, updated on 18-Apr-2019

Summary

Gene symbol
SPBC947.06c
Gene description
putative spermidine family transporter
Primary source
PomBase:SPBC947.06c
Locus tag
SPBC947.06c
Gene type
protein coding
RNA name
putative spermidine family transporter
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

Genomic context

See SPBC947.06c in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (661588..665070)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene histone promoter control protein Hip4 Neighboring gene putative ribosome biogenesis protein Rrp14-C Neighboring gene putative ferric-chelate reductase Frp2 Neighboring gene putative DIPSY family glycoprotein Neighboring gene miscRNA Neighboring gene miscRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
spermidine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
spermine transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
xenobiotic transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
drug transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
spermidine transmembrane transport IC
Inferred by Curator
more info
 
spermine transmembrane transport IC
Inferred by Curator
more info
 
Component Evidence Code Pubs
fungal-type vacuole membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
putative spermidine family transporter

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    661588..665070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021177.2NP_595270.1  putative spermidine family transporter [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595270.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43081
    Conserved Domains (2) summary
    cd06174
    Location:59483
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:64447
    MFS_1; Major Facilitator Superfamily
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