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iki3 putative elongator subunit Iki3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541017, updated on 5-Aug-2018

Summary

Gene symbol
iki3
Gene description
putative elongator subunit Iki3
Locus tag
SPBC36.07
Gene type
protein coding
RNA name
putative elongator subunit Iki3
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

Genomic context

See iki3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (853583..857560)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene putative spermidine family transporter Neighboring gene miscRNA Neighboring gene hypothetical protein Neighboring gene cysteine synthase Neighboring gene class 1 histone deacetylase Clr6 Neighboring gene farnesyl pyrophosphate synthetase Neighboring gene putative COG complex subunit Cog2 Neighboring gene U2 snRNP-associated protein sap61 Neighboring gene putative protein sorting protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
regulation of cytoplasmic translational fidelity IMP
Inferred from Mutant Phenotype
more info
PubMed 
tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
Elongator holoenzyme complex ISO
Inferred from Sequence Orthology
more info
 
cytosol HDA PubMed 

General protein information

Preferred Names
putative elongator subunit Iki3

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    853583..857560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021243.2NP_595335.1  putative elongator subunit Iki3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595335.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59704
    Conserved Domains (2) summary
    COG5290
    Location:11253
    COG5290; IkappaB kinase complex, IKAP component [Transcription]
    pfam04762
    Location:1899
    IKI3; IKI3 family
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