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SPBC3B8.03 putative saccharopine dehydrogenase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540908, updated on 5-Aug-2018

Summary

Gene symbol
SPBC3B8.03
Gene description
putative saccharopine dehydrogenase
Locus tag
SPBC3B8.03
Gene type
protein coding
RNA name
putative saccharopine dehydrogenase
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

Genomic context

See SPBC3B8.03 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (3391684..3393331, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene putative diphthamide biosynthesis protein Dph1 Neighboring gene putative transporter Neighboring gene miscRNA Neighboring gene CCAAT-binding factor complex subunit Php5 Neighboring gene putative nuclear cap-binding complex large subunit Neighboring gene NADPH-adrenodoxin reductase Arh1

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the SPBC3B8.03 gene: The SPBC3B8.03 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, M.oryzae, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
saccharopine dehydrogenase (NADP+, L-glutamate-forming) activity ISO
Inferred from Sequence Orthology
more info
 
saccharopine dehydrogenase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
lysine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
lysine biosynthetic process via aminoadipic acid IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
lysine biosynthetic process via aminoadipic acid IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosol HDA PubMed 

General protein information

Preferred Names
putative saccharopine dehydrogenase
NP_596411.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3391684..3393331 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022330.2NP_596411.1  putative saccharopine dehydrogenase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596411.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O59711
    Conserved Domains (3) summary
    COG1748
    Location:1396
    Lys9; Saccharopine dehydrogenase, NADP-dependent [Amino acid transport and metabolism]
    pfam03435
    Location:4119
    Sacchrp_dh_NADP; Saccharopine dehydrogenase NADP binding domain
    pfam16653
    Location:123439
    Sacchrp_dh_C; Saccharopine dehydrogenase C-terminal domain
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