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swi1 replication fork protection complex subunit Swi1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540728, updated on 5-May-2019

Summary

Gene symbol
swi1
Gene description
replication fork protection complex subunit Swi1
Locus tag
SPBC216.06c
Gene type
protein coding
RNA name
replication fork protection complex subunit Swi1
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

Genomic context

See swi1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003423.3 (907370..914892, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative methionine sulfoxide Neighboring gene ATR checkpoint kinase Rad3 Neighboring gene phosphatidylinositol kinase Tor2 Neighboring gene protein Cwf11 Neighboring gene miscRNA Neighboring gene putative glutamyl-tRNA amidotransferase alpha subunit

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Y-form DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
double-stranded DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA replication checkpoint IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
gene conversion at mating-type locus IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitotic DNA replication checkpoint IGI
Inferred from Genetic Interaction
more info
PubMed 
negative regulation of mitotic recombination IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
replication fork arrest IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
replication fork arrest IDA
Inferred from Direct Assay
more info
PubMed 
replication fork processing IMP
Inferred from Mutant Phenotype
more info
PubMed 
replication fork protection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
replication fork protection IDA
Inferred from Direct Assay
more info
PubMed 
replication fork protection IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
mitotic spindle pole body HDA PubMed 
nuclear chromatin IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear chromatin IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
replication fork protection complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
replication fork protection complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
replication fork protection complex subunit Swi1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    907370..914892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021265.2NP_595358.1  replication fork protection complex subunit Swi1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595358.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UUM2
    Conserved Domains (2) summary
    pfam05029
    Location:595956
    TIMELESS_C; Timeless protein C terminal region
    pfam04821
    Location:26278
    TIMELESS; Timeless protein
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