U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

clr1 SHREC complex intermodule linker subunit Clr1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540558, updated on 6-Jul-2026
Official Symbol
clr1
Official Full Name
SHREC complex intermodule linker subunit Clr1
Primary source
PomBase:SPBC2D10.17
Locus tag
SPOM_SPBC2D10.17
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Try the new Gene page
Try the new Transcripts and proteins table
See clr1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (2997091..3001136)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene myosin type V Neighboring gene ncRNA Neighboring gene peptidyl-tRNA hydrolase Pth1 Neighboring gene protein mhf1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ABC1 kinase family ubiquinone biosynthesis ATPase Coq8 Neighboring gene ribosome biogenesis protein Alb1

Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Histone deacetylase homologs regulate epigenetic inheritance of transcriptional silencing and chromosome segregation in fission yeast. Grewal SI, et al. Genetics, 1998 Oct. PMID 9755190, Free PMC Article
  2. SHREC Silences Heterochromatin via Distinct Remodeling and Deacetylation Modules. Job G, et al. Mol Cell, 2016 Apr 21. PMID 27105116, Free PMC Article
  3. Mutations in rik1, clr2, clr3 and clr4 genes asymmetrically derepress the silent mating-type loci in fission yeast. Ekwall K, et al. Genetics, 1994 Jan. PMID 8138176, Free PMC Article
  4. A novel jmjC domain protein modulates heterochromatization in fission yeast. Ayoub N, et al. Mol Cell Biol, 2003 Jun. PMID 12773576, Free PMC Article
  5. A conserved ncRNA-binding protein recruits silencing factors to heterochromatin through an RNAi-independent mechanism. Marina DB, et al. Genes Dev, 2013 Sep 1. PMID 24013500, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in chromatin organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in chromatin remodeling NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in heterochromatin formation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in pericentric heterochromatin formation EXP
Inferred from Experiment
more info
 PubMed 
involved_in pericentric heterochromatin formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in rDNA heterochromatin formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in silent mating-type cassette heterochromatin formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in subtelomeric heterochromatin formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of SHREC complex EXP
Inferred from Experiment
more info
 PubMed 
part_of SHREC complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of SHREC complex NAS
Non-traceable Author Statement
more info
 PubMed 
located_in chromosome, centromeric region IEA
Inferred from Electronic Annotation
more info
  
is_active_in chromosome, subtelomeric region IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chromosome, telomeric region IEA
Inferred from Electronic Annotation
more info
  
is_active_in mating-type region heterochromatin IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
is_active_in pericentric heterochromatin IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in rDNA heterochromatin IDA
Inferred from Direct Assay
more info
 PubMed 
Preferred Names
SHREC complex intermodule linker subunit Clr1

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2997091..3001136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022156.3 → NP_596236.1  SHREC complex intermodule linker subunit Clr1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596236.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74808
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials