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nrs1 putative asparagine--tRNA (Asn) ligase Nrs1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540046, updated on 5-Aug-2018

Summary

Gene symbol
nrs1
Gene description
putative asparagine--tRNA (Asn) ligase Nrs1
Locus tag
SPBC1773.10c
Gene type
protein coding
RNA name
putative asparagine--tRNA (Asn) ligase Nrs1
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ded81

Genomic context

See nrs1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (301754..303734, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene putative alpha-1,2-mannosyltransferase Omh4 Neighboring gene protein mug184 Neighboring gene putative CDC50 domain-containing protein Neighboring gene miscRNA Neighboring gene putative transcription factor

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the nrs1 gene: The nrs1 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
asparagine-tRNA ligase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
asparaginyl-tRNA aminoacylation IC
Inferred by Curator
more info
 
cytoplasmic translation NAS
Non-traceable Author Statement
more info
 
Component Evidence Code Pubs
cytosol HDA PubMed 

General protein information

Preferred Names
putative asparagine--tRNA (Asn) ligase Nrs1
NP_595125.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    301754..303734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021032.2NP_595125.1  putative asparagine--tRNA (Asn) ligase Nrs1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595125.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94567
    Conserved Domains (3) summary
    COG0017
    Location:128568
    AsnS; Aspartyl/asparaginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
    cd00776
    Location:242563
    AsxRS_core; Asx tRNA synthetase (AspRS/AsnRS) class II core domain. Assignment to class II aminoacyl-tRNA synthetases (aaRS) based upon its structure and the presence of three characteristic sequence motifs in the core domain. This family includes AsnRS as well as ...
    cd04323
    Location:143226
    AsnRS_cyto_like_N; AsnRS_cyto_like_N: N-terminal, anticodon recognition domain of the type found in human and Saccharomyces cerevisiae cytoplasmic asparaginyl-tRNA synthetase (AsnRS), in Brugia malayai AsnRs and, in various putative bacterial AsnRSs. This domain is a ...
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