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pht1 histone H2A.Z-like protein Pht1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539668, updated on 5-Sep-2021

Summary

Gene symbol
pht1
Gene description
histone H2A.Z-like protein Pht1
Locus tag
SPBC11B10.10c
Gene type
protein coding
RNA name
histone H2A.Z-like protein Pht1
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See pht1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1502203..1503468, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene miscRNA Neighboring gene cyclin-dependent protein kinase Cdk1/Cdc2 Neighboring gene tRNA Neighboring gene 5S ribosomal RNA

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the pht1 gene: The pht1 gene is conserved in human, chimpanzee, Rhesus monkey, cow, mouse, rat, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables DNA binding ISM
Inferred from Sequence Model
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of Swr1 complex IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in chromatin IDA
Inferred from Direct Assay
more info
PubMed 
part_of nucleosome ISM
Inferred from Sequence Model
more info
 
is_active_in nucleus HDA PubMed 

General protein information

Preferred Names
histone H2A.Z-like protein Pht1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1502203..1503468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021524.3NP_595630.3  histone H2A.Z-like protein Pht1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595630.3

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P48003
    Conserved Domains (2) summary
    COG5262
    Location:18139
    HTA1; Histone H2A [Chromatin structure and dynamics]
    cd00074
    Location:25127
    H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...
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