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pof7 F-box protein Pof7 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539142, updated on 2-Oct-2018

Summary

Gene symbol
pof7
Gene description
F-box protein Pof7
Locus tag
SPCC1827.08c
Gene type
protein coding
RNA name
F-box protein Pof7
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
SPCC70.11c

Genomic context

See pof7 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (2371514..2373502, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene putative methyltransferase Neighboring gene protein mug9 Neighboring gene hypothetical protein Neighboring gene putative U3 associated protein Utp25 Neighboring gene putative cholinephosphate cytidylyltransferase Neighboring gene putative acetyl-CoA ligase

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein binding, bridging ISM
Inferred from Sequence Model
more info
 
ubiquitin-protein transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ubiquitin-dependent protein catabolic process ISM
Inferred from Sequence Model
more info
 
Component Evidence Code Pubs
SCF ubiquitin ligase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm HDA PubMed 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosol HDA PubMed 
ubiquitin ligase complex ISM
Inferred from Sequence Model
more info
 

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    2371514..2373502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023533.2NP_588546.2  F-box protein Pof7 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588546.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74531
    Conserved Domains (1) summary
    pfam12937
    Location:112161
    F-box-like; F-box-like
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