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SPCC757.12 GPI-anchored glycosyl hydrolase family 13 protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538825, updated on 8-Sep-2019

Summary

Gene symbol
SPCC757.12
Gene description
GPI-anchored glycosyl hydrolase family 13 protein
Primary source
PomBase:SPCC757.12
Locus tag
SPCC757.12
Gene type
protein coding
RNA name
GPI-anchored glycosyl hydrolase family 13 protein
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

Genomic context

See SPCC757.12 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (72916..75522)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene putative transporter Neighboring gene putative V-ATPase assembly protein Neighboring gene tRNA Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene dipeptide transmembrane transporter Neighboring gene miscRNA Neighboring gene putative transporter

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
alpha-amylase activity ISM
Inferred from Sequence Model
more info
 
alpha-amylase activity (releasing maltohexaose) IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
fungal-type cell wall biogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
anchored component of external side of plasma membrane TAS
Traceable Author Statement
more info
PubMed 
cell wall ISS
Inferred from Sequence or Structural Similarity
more info
 
endoplasmic reticulum HDA PubMed 

General protein information

Preferred Names
GPI-anchored glycosyl hydrolase family 13 protein
NP_587687.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    72916..75522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022682.2NP_587687.1  GPI-anchored glycosyl hydrolase family 13 protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587687.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O74922
    Conserved Domains (3) summary
    cd11319
    Location:23401
    AmyAc_euk_AmyA; Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    pfam00128
    Location:61365
    Alpha-amylase; Alpha amylase, catalytic domain
    pfam09260
    Location:422490
    DUF1966; Domain of unknown function (DUF1966)
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