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set1 histone H3-K4 methyltransferase Set1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538762, updated on 18-Sep-2024

Summary

Official Symbol
set1
Official Full Name
histone H3-K4 methyltransferase Set1
Primary source
PomBase:SPCC306.04c
Locus tag
SPOM_SPCC306.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
kmt2
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Genomic context

See set1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_003421.2 (412293..415947, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Rab GTPase-binding protein Neighboring gene condensin complex non-SMC subunit Cnd2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene INSIG domain protein Neighboring gene ncRNA Neighboring gene family protein BIG1

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
histone H3-K4 methyltransferase Set1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    412293..415947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022805.3NP_587812.1  histone H3-K4 methyltransferase Set1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_587812.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7R4
    Conserved Domains (7) summary
    smart00317
    Location:783899
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    smart00508
    Location:904920
    PostSET; Cysteine-rich motif following a subset of SET domains
    COG0724
    Location:90226
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    COG2940
    Location:457920
    SET; SET domain-containing protein (function unknown) [General function prediction only]
    cd12303
    Location:96180
    RRM_spSet1p_like; RNA recognition motif in fission yeast Schizosaccharomyces pombe SET domain-containing protein 1 (spSet1p) and similar proteins
    pfam11764
    Location:641771
    N-SET; COMPASS (Complex proteins associated with Set1p) component N
    pfam11767
    Location:279342
    SET_assoc; Histone lysine methyltransferase SET associated