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SPCC132.01c nuclear export mediator factor NEMF [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2538747, updated on 5-Aug-2018

Summary

Gene symbol
SPCC132.01c
Gene description
nuclear export mediator factor NEMF
Locus tag
SPCC132.01c
Gene type
protein coding
RNA name
nuclear export mediator factor NEMF
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

Genomic context

See SPCC132.01c in Genome Data Viewer
Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (1325057..1328438, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene putative transporter chaperone complex subunit vtc4 Neighboring gene 60S ribosomal protein L34 Neighboring gene putative prohibitin Phb2 Neighboring gene Sir2 family histone deacetylase Hst2 Neighboring gene hypothetical protein Neighboring gene putative NAD-dependent glutamate dehydrogenase Gdh2

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the SPCC132.01c gene: The SPCC132.01c gene is conserved in human, chimpanzee, dog, cow, mouse, rat, chicken, fruit fly, mosquito, C.elegans, A.thaliana, rice, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
ribosomal large subunit binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
tRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
rescue of stalled ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ribosome-associated ubiquitin-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ribosome-associated ubiquitin-dependent protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
RQC complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
RQC complex ISO
Inferred from Sequence Orthology
more info
 
cytosol HDA PubMed 

General protein information

Preferred Names
nuclear export mediator factor NEMF

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1325057..1328438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001023135.2NP_588145.2  nuclear export mediator factor NEMF [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_588145.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9USN8
    Conserved Domains (3) summary
    COG1293
    Location:1682
    YloA; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains [Translation, ribosomal structure and biogenesis]
    pfam05670
    Location:569651
    DUF814; Domain of unknown function (DUF814)
    pfam11923
    Location:9211010
    DUF3441; Domain of unknown function (DUF3441)
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