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ZNF503-AS1 ZNF503 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 253264, updated on 25-Jan-2022

Summary

Official Symbol
ZNF503-AS1provided by HGNC
Official Full Name
ZNF503 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27370
See related
Ensembl:ENSG00000226051 AllianceGenome:HGNC:27370
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in esophagus (RPKM 2.0), colon (RPKM 1.7) and 21 other tissues See more
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Genomic context

See ZNF503-AS1 in Genome Data Viewer
Location:
10q22.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (75296383..75361678)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (77056141..77121436)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein L39 pseudogene 25 Neighboring gene high mobility group AT-hook 1 pseudogene 5 Neighboring gene zinc finger protein 503 Neighboring gene sperm autoantigenic protein 17 pseudogene 1 Neighboring gene VISTA enhancer hs484 Neighboring gene ZNF503 antisense RNA 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • ZNF503 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038223.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AC010997, AK023445, CB997793
    Related
    ENST00000416398.1
  2. NR_038224.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC010997, AK023445, CB997793
    Related
    ENST00000669449.1
  3. NR_038225.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an internal splice site resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC010997, AK023445, CB997793, DA832441
    Related
    ENST00000526759.7
  4. NR_038226.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) uses an alternate splice site and contains an additional internal exon, compared to variant 1.
    Source sequence(s)
    AC010997, AK023445, CB997793, CN360505
    Related
    ENST00000533822.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    75296383..75361678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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