U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINGO1-AS1 LINGO1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 253044, updated on 13-May-2022

Summary

Official Symbol
LINGO1-AS1provided by HGNC
Official Full Name
LINGO1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27368
See related
Ensembl:ENSG00000259666 AllianceGenome:HGNC:27368
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.8) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINGO1-AS1 in Genome Data Viewer
Location:
15q24.3
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (77641764..77649240)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (75502087..75509563)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (77934106..77941582)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370906 Neighboring gene Sharpr-MPRA regulatory region 8640 Neighboring gene Sharpr-MPRA regulatory region 5143 Neighboring gene leucine rich repeat and Ig domain containing 1 Neighboring gene LINGO1 antisense RNA 2 Neighboring gene chondroitin sulfate proteoglycan 4 pseudogene 13

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045123.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC042092
    Related
    ENST00000558691.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    77641764..77649240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    75502087..75509563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001242772.1: Suppressed sequence

    Description
    NM_001242772.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.