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CUTALP cutA divalent cation tolerance like, pseudogene [ Homo sapiens (human) ]

Gene ID: 253039, updated on 23-Nov-2021

Summary

Official Symbol
CUTALPprovided by HGNC
Official Full Name
cutA divalent cation tolerance like, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:27367
See related
Ensembl:ENSG00000226752
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PSMD5-AS1
Expression
Ubiquitous expression in lymph node (RPKM 7.2), prostate (RPKM 6.8) and 25 other tissues See more
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Genomic context

See CUTALP in Genome Data Viewer
Location:
9q33.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (120843075..120854373)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (123605353..123616651)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene beta-1,3-galactosyltransferase 9 Neighboring gene proteasome 26S subunit, non-ATPase 5 Neighboring gene Sharpr-MPRA regulatory regions 2033 and 13781 Neighboring gene PHD finger protein 19 Neighboring gene CRISPRi-validated cis-regulatory element chr9.2278 Neighboring gene TNF receptor associated factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • PSMD5 antisense RNA 1 (head to head)
  • cutA divalent cation tolerance homolog-like, pseudogene

Clone Names

  • DKFZp727C191

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024408.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL161911
    Related
    ENST00000640327.1
  2. NR_152405.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL161911
  3. NR_152406.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL161911
  4. NR_152407.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL161911, BQ883162

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    120843075..120854373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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