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Ncam1 neural cell adhesion molecule 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 24586, updated on 16-Oct-2021

Summary

Official Symbol
Ncam1provided by RGD
Official Full Name
neural cell adhesion molecule 1provided by RGD
Primary source
RGD:67378
See related
EnsemblRapid:ENSRNOG00000031890
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Cd56; Ncam; N-CAM; NCAMC; NCAM-1; NCAM-C; N-CAM-1
Summary
cell adhesion molecule; involved in neuronal cell adhesion [RGD, Feb 2006]
Expression
Biased expression in Brain (RPKM 216.9), Kidney (RPKM 51.7) and 6 other tissues See more
Orthologs
NEW
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Genomic context

See Ncam1 in Genome Data Viewer
Location:
8q23
Exon count:
26
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (49865629..50165687, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (53836797..54134881, complement)

Chromosome 8 - NC_051343.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102556026 Neighboring gene uncharacterized LOC120094371 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene uncharacterized LOC120094147

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC124601

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables LRR domain binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables cytoskeletal protein binding TAS
Traceable Author Statement
more info
PubMed 
enables fibroblast growth factor receptor binding TAS
Traceable Author Statement
more info
PubMed 
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 
enables phosphatase binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in aging IDA
Inferred from Direct Assay
more info
PubMed 
involved_in animal organ regeneration IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in axonal fasciculation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in brain development IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules TAS
Traceable Author Statement
more info
PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in cell adhesion TAS
Traceable Author Statement
more info
PubMed 
acts_upstream_of_or_within cell surface receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to inorganic substance IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in cellular response to molecule of bacterial origin IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in commissural neuron axon guidance ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within homotypic cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in learning or memory IDA
Inferred from Direct Assay
more info
PubMed 
involved_in learning or memory IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in modulation of chemical synaptic transmission IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in multicellular organismal response to stress IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of cell death IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neuron development IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within neuron projection development ISO
Inferred from Sequence Orthology
more info
 
involved_in peripheral nervous system axon regeneration IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within positive regulation of calcium-mediated signaling ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cardiac muscle cell proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of exocyst assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of semaphorin-plexin signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of sensory perception of pain IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to activity IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to cocaine IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to inorganic substance IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to lead ion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to xenobiotic stimulus IDA
Inferred from Direct Assay
more info
PubMed 
involved_in thalamus development IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in Schaffer collateral - CA1 synapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in Schaffer collateral - CA1 synapse IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in axon ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in cell-cell junction ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in external side of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in growth cone ISO
Inferred from Sequence Orthology
more info
 
located_in growth cone TAS
Traceable Author Statement
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in integral component of postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in integral component of postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in integral component of presynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in integral component of presynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
neural cell adhesion molecule 1
NP_113709.1
XP_006243048.1
XP_006243050.1
XP_006243056.1
XP_017450949.1
XP_017450950.1
XP_017450952.1
XP_017450953.1
XP_017450954.1
XP_038936733.1
XP_038936735.1
XP_038936736.1
XP_038936737.1
XP_038936738.1
XP_038936739.1
XP_038936740.1
XP_038936741.1
XP_038936742.1
XP_038936743.1
XP_038936744.1
XP_038936745.1
XP_038936746.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001395707.1NP_001382636.1  neural cell adhesion molecule 1 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    JACYVU010000198
    Conserved Domains (9) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124190
    IG_like; Immunoglobulin like
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam05109
    Location:8361127
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:613695
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  2. NM_001395708.1NP_001382637.1  neural cell adhesion molecule 1 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    JACYVU010000198
    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307403
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:499596
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:603685
    fn3; Fibronectin type III domain
    pfam13927
    Location:412484
    Ig_3; Immunoglobulin domain
    cd00096
    Location:423427
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  3. NM_001395709.1NP_001382638.1  neural cell adhesion molecule 1 isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    JACYVU010000198
  4. NM_001395710.1NP_001382639.1  neural cell adhesion molecule 1 isoform 4 precursor

    Status: VALIDATED

    Source sequence(s)
    JACYVU010000198
    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307403
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:499596
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:603684
    fn3; Fibronectin type III domain
    pfam13927
    Location:412484
    Ig_3; Immunoglobulin domain
    cd00096
    Location:423427
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  5. NM_031521.3NP_113709.1  neural cell adhesion molecule 1 isoform 5 precursor

    See identical proteins and their annotated locations for NP_113709.1

    Status: VALIDATED

    Source sequence(s)
    JACYVU010000198
    UniProtKB/Swiss-Prot
    P13596
    Related
    ENSRNOP00000046828.6, ENSRNOT00000047666.6
    Conserved Domains (8) summary
    cd05730
    Location:211308
    Ig3_NCAM-1_like; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    cd05865
    Location:20115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:307413
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:429497
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:422500
    IG_like; Immunoglobulin like
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:218305
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:613694
    fn3; Fibronectin type III domain

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051343.1 Reference mRatBN7.2 Primary Assembly

    Range
    49865629..50165687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017595463.2XP_017450952.1  neural cell adhesion molecule 1 isoform X13

    Related
    ENSRNOP00000048442.5, ENSRNOT00000042281.7
  2. XM_017595461.2XP_017450950.1  neural cell adhesion molecule 1 isoform X8

    Related
    ENSRNOP00000079021.1, ENSRNOT00000113915.1
  3. XM_006242994.3XP_006243056.1  neural cell adhesion molecule 1 isoform X12

    UniProtKB/TrEMBL
    Q3T1H3
    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307403
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:499596
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:603685
    fn3; Fibronectin type III domain
    pfam13927
    Location:412484
    Ig_3; Immunoglobulin domain
    cd00096
    Location:423427
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  4. XM_039080812.1XP_038936740.1  neural cell adhesion molecule 1 isoform X11

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307403
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:499596
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:604685
    fn3; Fibronectin type III domain
    pfam13927
    Location:412484
    Ig_3; Immunoglobulin domain
    cd00096
    Location:423427
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  5. XM_017595460.2XP_017450949.1  neural cell adhesion molecule 1 isoform X7

  6. XM_006242988.3XP_006243050.1  neural cell adhesion molecule 1 isoform X6

    Conserved Domains (9) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124190
    IG_like; Immunoglobulin like
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam05109
    Location:8361127
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:613695
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  7. XM_039080811.1XP_038936739.1  neural cell adhesion molecule 1 isoform X10

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:614695
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  8. XM_039080809.1XP_038936737.1  neural cell adhesion molecule 1 isoform X5

    Conserved Domains (9) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124190
    IG_like; Immunoglobulin like
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam05109
    Location:8371128
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:614696
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  9. XM_039080808.1XP_038936736.1  neural cell adhesion molecule 1 isoform X4

    Related
    ENSRNOP00000071509.1, ENSRNOT00000082257.2
    Conserved Domains (9) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam05109
    Location:8401131
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:618699
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  10. XM_006242986.3XP_006243048.1  neural cell adhesion molecule 1 isoform X3

    Conserved Domains (8) summary
    cd05730
    Location:211308
    Ig3_NCAM-1_like; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    cd05865
    Location:20115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:307413
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:429497
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:422500
    IG_like; Immunoglobulin like
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:218305
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:618700
    fn3; Fibronectin type III domain
  11. XM_039080810.1XP_038936738.1  neural cell adhesion molecule 1 isoform X9

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124190
    IG_like; Immunoglobulin like
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:649731
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  12. XM_039080807.1XP_038936735.1  neural cell adhesion molecule 1 isoform X2

    Conserved Domains (9) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam05109
    Location:8411132
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:619700
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  13. XM_039080805.1XP_038936733.1  neural cell adhesion molecule 1 isoform X1

    Conserved Domains (9) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124190
    IG_like; Immunoglobulin like
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam05109
    Location:8421133
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam00041
    Location:619701
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  14. XM_017595465.2XP_017450954.1  neural cell adhesion molecule 1 isoform X20

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307403
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:499596
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:603684
    fn3; Fibronectin type III domain
    pfam13927
    Location:412484
    Ig_3; Immunoglobulin domain
    cd00096
    Location:423427
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  15. XM_039080817.1XP_038936745.1  neural cell adhesion molecule 1 isoform X19

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307403
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:499596
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:603685
    fn3; Fibronectin type III domain
    pfam13927
    Location:412484
    Ig_3; Immunoglobulin domain
    cd00096
    Location:423427
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  16. XM_039080816.1XP_038936744.1  neural cell adhesion molecule 1 isoform X18

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307403
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:499596
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:604685
    fn3; Fibronectin type III domain
    pfam13927
    Location:412484
    Ig_3; Immunoglobulin domain
    cd00096
    Location:423427
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  17. XM_039080818.1XP_038936746.1  neural cell adhesion molecule 1 isoform X21

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307403
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:499596
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:639720
    fn3; Fibronectin type III domain
    pfam13927
    Location:412484
    Ig_3; Immunoglobulin domain
    cd00096
    Location:423427
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  18. XM_039080815.1XP_038936743.1  neural cell adhesion molecule 1 isoform X17

    Related
    ENSRNOP00000080203.1, ENSRNOT00000099284.1
    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:613694
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  19. XM_039080814.1XP_038936742.1  neural cell adhesion molecule 1 isoform X16

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00409
    Location:124190
    IG; Immunoglobulin
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:618699
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
  20. XM_017595464.2XP_017450953.1  neural cell adhesion molecule 1 isoform X15

  21. XM_039080813.1XP_038936741.1  neural cell adhesion molecule 1 isoform X14

    Conserved Domains (8) summary
    cd05730
    Location:211308
    IgI_3_NCAM-1; Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule 1 (NCAM-1); member of the I-set of IgSF domains
    cd05869
    Location:307413
    IgI_NCAM-1; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 1 (NCAM-1)
    smart00410
    Location:124190
    IG_like; Immunoglobulin like
    cd00063
    Location:509606
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:649731
    fn3; Fibronectin type III domain
    pfam13927
    Location:422494
    Ig_3; Immunoglobulin domain
    cd00096
    Location:433437
    Ig; Ig strand B [structural motif]
    cd05865
    Location:20116
    IgI_1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule (NCAM-1); member of the I-set of Ig superfamily (IgSF) domains
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