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Ankub1 ankyrin repeat and ubiquitin domain containing 1 [ Mus musculus (house mouse) ]

Gene ID: 242037, updated on 9-May-2024

Summary

Official Symbol
Ankub1provided by MGI
Official Full Name
ankyrin repeat and ubiquitin domain containing 1provided by MGI
Primary source
MGI:MGI:2685256
See related
Ensembl:ENSMUSG00000074591 AllianceGenome:MGI:2685256
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm410
Summary
Is expressed in brain; reproductive system; and respiratory system. Orthologous to human ANKUB1 (ankyrin repeat and ubiquitin domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Ankub1 in Genome Data Viewer
Location:
3 D; 3 27.97 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (57574843..57599958, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (57667422..57692537, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 26671 Neighboring gene microRNA 6377 Neighboring gene predicted gene, 46805 Neighboring gene COMM domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E7913 Neighboring gene STARR-seq mESC enhancer starr_07737 Neighboring gene STARR-seq mESC enhancer starr_07738 Neighboring gene ribosomal protein S11 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr3:57539802-57540103 Neighboring gene ring finger protein 13 Neighboring gene ribosomal protein L7A pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (2) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
protein ANKUB1
Names
ankrin repeat and ubiquitin domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033349.2NP_001028521.1  protein ANKUB1

    See identical proteins and their annotated locations for NP_001028521.1

    Status: PROVISIONAL

    Source sequence(s)
    AK138483
    Consensus CDS
    CCDS17363.1
    UniProtKB/Swiss-Prot
    Q3UUE9
    Related
    ENSMUSP00000096689.4, ENSMUST00000099091.4
    Conserved Domains (2) summary
    smart00213
    Location:178
    UBQ; Ubiquitin homologues
    cl00155
    Location:173
    UBQ; Ubiquitin-like proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    57574843..57599958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)