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Calhm3 calcium homeostasis modulator 3 [ Mus musculus (house mouse) ]

Gene ID: 240669, updated on 11-Mar-2023

Summary

Official Symbol
Calhm3provided by MGI
Official Full Name
calcium homeostasis modulator 3provided by MGI
Primary source
MGI:MGI:3645665
See related
Ensembl:ENSMUSG00000094219 AllianceGenome:MGI:3645665
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG240669
Summary
Enables voltage-gated ion channel activity. Involved in ATP transport; protein heterooligomerization; and sensory perception of taste. Located in basolateral plasma membrane. Orthologous to human CALHM3 (calcium homeostasis modulator 3). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Calhm3 in Genome Data Viewer
Location:
19; 19 C3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (47140138..47146203, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (47151699..47157764, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene calcium homeostasis modulator family member 2 Neighboring gene calcium homeostasis modulator 1 Neighboring gene H1.11 linker histone, pseudogene Neighboring gene neuralized E3 ubiquitin protein ligase 1A Neighboring gene predicted gene, 36693

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables monoatomic cation channel activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables voltage-gated monoatomic ion channel activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in ATP transport IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in protein heterooligomerization IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within response to stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in sensory perception of taste IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021061.1 

    Range
    101..6166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    47140138..47146203 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)